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CAZyme Information: KAG6616406.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6616406.1 | |||||||||||
| CAZy Family | GT22 | |||||||||||
| CAZyme Description | endopolygalacturonase 6 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.09e-66 | 48 | 360 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.73e-14 | 86 | 349 | 122 | 379 | polygalacturonase |
| 227721 | Pgu1 | 2.20e-14 | 99 | 288 | 200 | 404 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 5.32e-13 | 48 | 327 | 51 | 337 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 6.01e-12 | 47 | 323 | 79 | 370 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.79e-248 | 1 | 360 | 1 | 360 | |
| 5.11e-207 | 1 | 360 | 1 | 363 | |
| 4.96e-206 | 23 | 360 | 1 | 339 | |
| 2.04e-201 | 1 | 360 | 1 | 361 | |
| 3.82e-195 | 1 | 360 | 1 | 363 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.61e-77 | 28 | 360 | 6 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.61e-77 | 28 | 360 | 6 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.27e-75 | 32 | 360 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.79e-75 | 31 | 360 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 1.24e-73 | 32 | 357 | 2 | 334 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.39e-80 | 9 | 360 | 11 | 368 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
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| 1.19e-79 | 1 | 360 | 1 | 364 | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaB PE=1 SV=2 |
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| 1.17e-78 | 27 | 360 | 32 | 371 | Polygalacturonase OS=Penicillium janthinellum OX=5079 PE=3 SV=1 |
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| 2.52e-78 | 12 | 360 | 7 | 360 | Probable endopolygalacturonase B OS=Aspergillus kawachii OX=1069201 GN=pgaB PE=3 SV=1 |
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| 3.99e-77 | 1 | 360 | 1 | 360 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.003058 | 0.996948 | CS pos: 18-19. Pr: 0.8392 |