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CAZyme Information: KAG6616233.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6616233.1 | |||||||||||
| CAZy Family | GT20 | |||||||||||
| CAZyme Description | putative polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 164 | 456 | 1.2e-59 | 0.8953846153846153 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.39e-67 | 158 | 452 | 3 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 3.34e-28 | 196 | 459 | 124 | 381 | polygalacturonase |
| 178580 | PLN03003 | 2.67e-23 | 162 | 435 | 57 | 337 | Probable polygalacturonase At3g15720 |
| 227721 | Pgu1 | 8.51e-23 | 198 | 396 | 189 | 404 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215426 | PLN02793 | 1.73e-20 | 206 | 429 | 143 | 368 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 469 | 1 | 469 | |
| 1.65e-201 | 158 | 469 | 16 | 327 | |
| 2.96e-200 | 158 | 469 | 95 | 406 | |
| 7.94e-175 | 158 | 468 | 60 | 370 | |
| 1.08e-152 | 158 | 469 | 69 | 380 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.02e-57 | 158 | 467 | 28 | 342 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.02e-57 | 158 | 467 | 28 | 342 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.52e-56 | 158 | 465 | 20 | 333 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 7.14e-56 | 158 | 467 | 20 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.28e-52 | 158 | 400 | 24 | 270 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.38e-63 | 158 | 457 | 49 | 351 | Probable endopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaB PE=3 SV=1 |
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| 8.97e-63 | 120 | 457 | 8 | 351 | Probable endopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaB PE=3 SV=1 |
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| 3.49e-62 | 155 | 465 | 46 | 360 | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaB PE=1 SV=2 |
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| 3.49e-62 | 158 | 457 | 49 | 351 | Probable endopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaB PE=3 SV=1 |
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| 4.64e-62 | 158 | 465 | 45 | 356 | Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999490 | 0.000550 |