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CAZyme Information: KAG6613988.1

You are here: Home > Sequence: KAG6613988.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6613988.1
CAZy Family GH7
CAZyme Description putative choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 JAFJYM010000031|CGC2 47628.02 6.0192
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6613988.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 77 429 5.3e-26 0.41585760517799353

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 4.99e-15 80 427 28 499
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 7.59e-12 304 428 1 114
GMC oxidoreductase. This domain found associated with pfam00732.
235000 PRK02106 5.85e-09 77 275 24 249
choline dehydrogenase; Validated
366272 GMC_oxred_N 2.53e-06 141 280 24 183
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.84e-199 1 428 18 606
2.01e-09 142 428 83 491
4.16e-08 77 315 80 347
6.41e-08 334 428 478 573
8.51e-08 297 427 460 574

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.98e-06 77 197 20 139
Crystal structure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti]
9.14e-06 77 197 36 155
Crystal structure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti]

Swiss-Prot Hits      help

KAG6613988.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999132 0.000883

TMHMM  Annotations      download full data without filtering help

Start End
30 52