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CAZyme Information: KAG6613983.1

You are here: Home > Sequence: KAG6613983.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6613983.1
CAZy Family GH7
CAZyme Description putative choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
648 70596.45 6.2389
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6613983.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 74 634 2e-105 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.96e-89 75 635 7 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 3.44e-82 73 633 3 532
choline dehydrogenase; Validated
366272 GMC_oxred_N 5.85e-29 158 381 24 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
398739 GMC_oxred_C 4.78e-26 475 628 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 2.47e-16 76 634 56 579
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 644 18 651
6.87e-61 73 637 3 529
4.28e-58 74 632 48 600
8.07e-53 75 636 24 559
2.36e-50 71 633 15 551

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-52 71 632 3 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.40e-52 72 632 4 560
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.40e-52 71 632 3 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
3.40e-52 71 632 3 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
4.43e-52 71 632 19 576
Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.68e-56 73 633 43 597
Fatty acid photodecarboxylase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=FAP PE=1 SV=1
9.96e-54 73 637 38 576
Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2
1.53e-51 76 632 2 527
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
5.61e-51 71 632 79 636
Fatty acid photodecarboxylase, chloroplastic OS=Chlorella variabilis OX=554065 GN=FAP PE=1 SV=1
8.73e-51 72 632 1 530
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.997126 0.002887

TMHMM  Annotations      download full data without filtering help

Start End
30 52