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CAZyme Information: KAG6612846.1

You are here: Home > Sequence: KAG6612846.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6612846.1
CAZy Family GH53
CAZyme Description histone acetyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2871 JAFJYM010000039|CGC7 314440.26 8.2746
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 20 549 1.5e-104 0.9744525547445255

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
99938 Bromo_plant1 1.22e-42 1884 1979 3 98
Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
225186 BetA 4.20e-36 22 557 1 539
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
197636 BROMO 2.01e-30 1882 1983 8 107
bromo domain.
400497 HAT_KAT11 2.37e-29 2229 2433 6 236
Histone acetylation protein. Histone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly. This family contains the fungal KAT11 protein (previously known as RTT109) which is required for H3K56 acetylation. Loss of KAT11 results in the loss of H3K56 acetylation, both on bulk histone and on chromatin. KAT11 and H3K56 acetylation appear to correlate with actively transcribed genes and associate with the elongating form of Pol II in yeast. This family also incorporates the p300/CBP histone acetyltransferase domain which has different catalytic properties and cofactor regulation to KAT11.
99931 Bromo_BDF1_2_II 2.10e-28 1887 1980 6 102
Bromodomain. BDF1/BDF2 like subfamily, restricted to fungi, repeat II. BDF1 and BDF2 are yeast transcription factors involved in the expression of a wide range of genes, including snRNAs; they are required for sporulation and DNA repair and protect histone H4 from deacetylation. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.31e-278 1 588 1 582
1.63e-134 13 533 7 526
5.31e-133 28 588 23 577
9.70e-120 22 588 17 577
1.05e-119 8 546 4 544

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.71e-85 1902 2716 39 615
Crystal Structure of the Catalytic Core of CBP [Mus musculus],5U7G_B Crystal Structure of the Catalytic Core of CBP [Mus musculus]
4.57e-78 1902 2438 30 478
Cryo-EM structure of p300-p53 protein complex [Homo sapiens],6K4N_A Cryo-EM structure of p300 [Homo sapiens]
7.17e-78 1902 2438 31 479
Transcription factor dimerization activates the p300 acetyltransferase [Homo sapiens],6GYR_B Transcription factor dimerization activates the p300 acetyltransferase [Homo sapiens],6GYR_C Transcription factor dimerization activates the p300 acetyltransferase [Homo sapiens],6GYR_D Transcription factor dimerization activates the p300 acetyltransferase [Homo sapiens]
1.16e-76 1902 2433 43 486
Structural basis for autoinhibition of the acetyltransferase activity of p300 [Homo sapiens],4BHW_B Structural basis for autoinhibition of the acetyltransferase activity of p300 [Homo sapiens],5LKT_A Crystal structure of the p300 acetyltransferase catalytic core with butyryl-coenzyme A. [Homo sapiens],5LKU_A Crystal structure of the p300 acetyltransferase catalytic core with coenzyme A. [Homo sapiens],5LKX_A Crystal structure of the p300 acetyltransferase catalytic core with propionyl-coenzyme A. [Homo sapiens],5LKZ_A Crystal structure of the p300 acetyltransferase catalytic core with crotonyl-coenzyme A. [Homo sapiens]
6.19e-60 2004 2433 8 362
Chain A, Histone acetyltransferase p300 [Homo sapiens],7VHY_B Chain B, Histone acetyltransferase p300 [Homo sapiens],7VHZ_A Chain A, Histone acetyltransferase p300 [Homo sapiens],7VHZ_B Chain B, Histone acetyltransferase p300 [Homo sapiens],7VI0_A Chain A, Histone acetyltransferase p300 [Homo sapiens],7VI0_B Chain B, Histone acetyltransferase p300 [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.39e-176 1998 2849 955 1696
Histone acetyltransferase HAC12 OS=Arabidopsis thaliana OX=3702 GN=HAC12 PE=3 SV=2
2.33e-164 1998 2849 946 1687
Histone acetyltransferase HAC1 OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=2
8.36e-156 1998 2849 959 1659
Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0137500 PE=3 SV=2
6.07e-152 1998 2849 927 1659
Histone acetyltransferase HAC5 OS=Arabidopsis thaliana OX=3702 GN=HAC5 PE=2 SV=1
3.91e-147 1999 2849 722 1461
Histone acetyltransferase HAC4 OS=Arabidopsis thaliana OX=3702 GN=HAC4 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000596 0.999376 CS pos: 22-23. Pr: 0.9668

TMHMM  Annotations      help

There is no transmembrane helices in KAG6612846.1.