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CAZyme Information: KAG6612650.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6612650.1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | putative polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 27 | 163 | 1.8e-25 | 0.38769230769230767 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.79e-25 | 10 | 169 | 8 | 176 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 2.80e-09 | 51 | 163 | 199 | 319 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 6.24e-05 | 41 | 170 | 124 | 247 | polygalacturonase |
| 178580 | PLN03003 | 1.28e-04 | 53 | 163 | 115 | 220 | Probable polygalacturonase At3g15720 |
| 215120 | PLN02188 | 2.45e-04 | 5 | 169 | 90 | 244 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.14e-120 | 1 | 174 | 1 | 174 | |
| 1.19e-84 | 4 | 164 | 65 | 233 | |
| 3.01e-80 | 4 | 164 | 66 | 230 | |
| 5.67e-80 | 4 | 164 | 88 | 252 | |
| 7.95e-80 | 4 | 164 | 100 | 264 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.04e-23 | 4 | 163 | 17 | 185 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.25e-23 | 4 | 163 | 25 | 193 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.25e-23 | 4 | 163 | 25 | 193 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.09e-23 | 4 | 163 | 21 | 190 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 1.94e-19 | 4 | 160 | 17 | 182 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.85e-25 | 4 | 163 | 61 | 231 | Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1 |
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| 6.93e-25 | 4 | 163 | 62 | 232 | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1 |
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| 1.85e-24 | 4 | 163 | 62 | 232 | Probable endopolygalacturonase C OS=Aspergillus aculeatus OX=5053 GN=pgaC PE=2 SV=1 |
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| 4.55e-23 | 2 | 163 | 56 | 228 | Polygalacturonase OS=Penicillium expansum OX=27334 GN=PEPG1 PE=3 SV=1 |
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| 4.65e-23 | 4 | 160 | 63 | 229 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000012 | 0.000030 |