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CAZyme Information: KAG6612491.1

You are here: Home > Sequence: KAG6612491.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6612491.1
CAZy Family GH5
CAZyme Description Pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
339 JAFJYM010000039|CGC8 36025.65 9.6771
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 36 310 5.3e-72 0.9201388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 1.43e-47 35 310 13 268
putative pectinesterase
395871 Pectinesterase 2.96e-43 35 312 2 276
Pectinesterase.
178113 PLN02497 2.09e-41 35 310 34 302
probable pectinesterase
178372 PLN02773 3.00e-40 30 310 2 278
pectinesterase
215173 PLN02304 8.41e-39 29 310 71 350
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.60e-174 1 339 1 338
1.31e-172 1 339 1 338
1.49e-154 6 339 7 344
6.03e-154 6 339 7 344
2.55e-141 15 339 16 346

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-57 25 338 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.26e-57 25 338 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
6.81e-33 35 312 9 283
Pectin methylesterase from Carrot [Daucus carota]
3.43e-28 45 317 13 286
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.62e-11 36 306 7 315
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.14e-74 7 339 5 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
9.06e-74 27 338 20 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
2.04e-64 27 338 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
2.04e-64 27 338 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
8.09e-64 1 338 1 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000223 0.999755 CS pos: 19-20. Pr: 0.9781

TMHMM  Annotations      help

There is no transmembrane helices in KAG6612491.1.