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CAZyme Information: KAG6612054.1

You are here: Home > Sequence: KAG6612054.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6612054.1
CAZy Family GH43
CAZyme Description reverse transcriptase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
287 32154.07 5.3461
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6612054.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 156 283 5.5e-38 0.49795918367346936

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
407771 Integrase_H2C2 2.69e-13 102 152 2 50
Integrase zinc binding domain. This zinc binding domain is found in a wide variety of integrase proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.01e-71 153 286 50 184
2.01e-71 153 286 50 184
2.01e-71 153 286 50 184
2.01e-71 153 286 50 184
2.01e-71 153 286 50 184

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.66e-13 156 286 34 168
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

KAG6612054.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000064 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in KAG6612054.1.