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CAZyme Information: KAG6612017.1

You are here: Home > Sequence: KAG6612017.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6612017.1
CAZy Family GH43
CAZyme Description Oxygen-dependent choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
99 10529.59 3.7718
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6612017.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 4 95 4.2e-25 0.35918367346938773

CDD Domains      help

KAG6612017.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.78e-38 5 96 19 115
8.27e-38 5 96 82 178
8.27e-38 5 96 82 178
8.27e-38 5 96 82 178
9.46e-38 5 96 88 184

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.78e-15 6 96 68 159
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

KAG6612017.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000035 0.000018

TMHMM  Annotations      help

There is no transmembrane helices in KAG6612017.1.