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CAZyme Information: KAG6611964.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6611964.1 | |||||||||||
| CAZy Family | GH43 | |||||||||||
| CAZyme Description | Oxygen-dependent choline dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA17 | 10 | 260 | 1.4e-67 | 0.9795918367346939 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215130 | PLN02217 | 1.31e-05 | 186 | 281 | 562 | 664 | probable pectinesterase/pectinesterase inhibitor |
| 411474 | fibronec_FbpA | 4.38e-05 | 194 | 286 | 153 | 255 | LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity. |
| 411474 | fibronec_FbpA | 1.16e-04 | 192 | 286 | 119 | 220 | LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity. |
| 139494 | PRK13335 | 1.83e-04 | 194 | 286 | 68 | 155 | superantigen-like protein SSL3; Reviewed. |
| 183854 | PRK13042 | 2.09e-04 | 192 | 262 | 22 | 98 | superantigen-like protein SSL4; Reviewed. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.38e-121 | 1 | 214 | 1 | 211 | |
| 5.38e-121 | 1 | 214 | 1 | 211 | |
| 6.62e-121 | 1 | 214 | 7 | 217 | |
| 7.64e-121 | 1 | 214 | 1 | 211 | |
| 9.39e-121 | 1 | 214 | 7 | 217 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.62e-30 | 23 | 188 | 1 | 172 | Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000228 | 0.999735 | CS pos: 22-23. Pr: 0.9770 |