CAZyme Information: KAG6609897.1

Basic Information

• Species: Phytophthora cinnamomi
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
• CAZyme ID: KAG6609897.1
• CAZy Family: GH3
• CAZyme Description: Lysosomal beta glucosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
776	JAFJYM010000054|CGC1	84541.85	4.2909

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcinnamomiGKB4	19981	N/A	0	19981

• Gene Location: location=JAFJYM010000054:1295800-1298130(-)

Full Sequence      

MLKTWVGALCCATLGLTAARSIDEFDDQARAIVDNLTTEQVLGQLAQVGVSALLNDDYSL
NETLVRDYAKLKIGSYLTTPFTSGANDITGEVGWDVSQWRDIITRIQEIAMEENDGIPMV
YGIDTVHGAGFVLNSTVFGAQLNGAASFNPDLVYEMGRIGAQDTRAAGIPWVFGPILEIA
SNPLWPRTYETFGEDPHLVSVMADAVVRGLQSDNQTAACMKHFVAYSKTPTGHDQDQVQI
SDFDLLNYFVRPFKAAIDAGALTTMENYISINGVPVIGNHRILDVLLREDLAYDGMAVSD
FGEIGSMNSFHRVARDANEAVRFSYTHTGIDMSMGFDSTYLNGTKLLIEESPEYLDRLKD
SARRIIKLKLQLGLYDNPVPGADDVALVRSDDDVQKSLDMARESIVLLQNNDSTLPISTS
ASVFLTGHSAHNIGNQCGGWSVSWHGFTGNANFPNGISVKEGMETIAGSDKITYFNGLDS
DGNYSEANMTTAKQYASQADYTIAVIGEHPYAEKTGDLNDLALPAGQIEYVKELASTGTK
VVVVLFEGRPRLLRDLPENVHAVVNGLLACEQGGKAMAEILYGQVNPSGRMPITYPKDPA
NIMIPYNHRVSTQCADSDYCEMQWDFGTGLSYTEFTYSDLTLSKTNVTSSSDTIDVSVVV
TNSGSMAGKETVMLFLIQPYRSISVPEVKQLKKFSKISLEAGASQTVSFTLSADDWSVYK
PQIGEGFKQVAEDTDYVIAIKPETDCDVYNETAAANPLCATFTLQTGDYPYGALLD

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	112	334	9.5e-59	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	2.43e-119	100	732	86	742	beta-glucosidase BglX.
224389	BglX	2.22e-68	36	442	1	373	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	7.96e-48	37	368	1	316	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	1.18e-47	129	711	105	742	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	8.11e-42	405	632	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	3.86e-314	1	765	1	763
UIZ29613.1|GH3	5.61e-289	1	770	46	825
UIZ27116.1|GH3	1.11e-288	45	765	1	725
UIZ29432.1|GH3	2.26e-284	1	770	1	769
CCA27737.1|GH3	3.28e-279	16	765	55	809

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	2.52e-119	30	715	18	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	3.62e-83	31	723	9	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	1.87e-82	31	723	9	705	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	1.91e-82	31	723	10	706	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5TF0_A	2.69e-82	19	740	3	736	Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	8.31e-129	33	740	80	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	1.84e-118	30	715	40	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|Q56078|BGLX_SALTY	1.86e-84	95	723	88	737	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	9.55e-83	100	723	86	737	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	2.86e-79	71	747	9	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000361	0.999597	CS pos: 19-20. Pr: 0.9663

TMHMM  Annotations     

There is no transmembrane helices in KAG6609897.1.