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CAZyme Information: KAG6604653.1

You are here: Home > Sequence: KAG6604653.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6604653.1
CAZy Family GH28
CAZyme Description Carbohydrate-binding domain, family 9
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 49750.32 4.8738
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG6604653.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM9 72 267 2.5e-26 0.8461538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
187678 CBM9_like_3 5.76e-48 72 302 1 200
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily may co-occur with various other domains.
187676 CBM9_like_2 3.16e-11 65 256 6 170
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized subfamily are typically found at the N-terminus of longer proteins that lack additional annotation with domain footprints.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.76e-58 51 362 5 280
9.80e-58 40 399 13 337
2.99e-57 41 325 19 283
5.36e-57 46 362 18 303
5.53e-57 51 420 32 364

PDB Hits      help

KAG6604653.1 has no PDB hit.

Swiss-Prot Hits      help

KAG6604653.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.004767 0.995181 CS pos: 22-23. Pr: 0.9590

TMHMM  Annotations      help

There is no transmembrane helices in KAG6604653.1.