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CAZyme Information: KAG6586769.1

You are here: Home > Sequence: KAG6586769.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6586769.1
CAZy Family CE8
CAZyme Description Pectin methylesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
347 37358.64 6.1057
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 48 323 1.2e-73 0.9201388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 1.60e-47 49 320 9 276
Pectinesterase.
178372 PLN02773 8.63e-45 35 322 2 282
pectinesterase
178051 PLN02432 1.95e-44 36 324 9 274
putative pectinesterase
178113 PLN02497 3.68e-43 37 324 31 308
probable pectinesterase
215357 PLN02665 2.61e-42 49 340 77 359
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.09e-166 1 347 1 348
7.98e-166 1 347 1 344
1.61e-165 1 347 1 344
4.70e-158 1 347 1 346
4.87e-158 1 347 1 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.84e-58 32 346 3 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.59e-58 32 346 3 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5.43e-36 49 320 16 283
Pectin methylesterase from Carrot [Daucus carota]
7.91e-31 49 320 12 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.67e-73 14 346 6 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
9.33e-73 14 347 6 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.20e-64 32 346 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
5.20e-64 32 346 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
4.10e-63 32 346 28 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000229 0.999733 CS pos: 20-21. Pr: 0.9487

TMHMM  Annotations      help

There is no transmembrane helices in KAG6586769.1.