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CAZyme Information: KAG6580104.1

You are here: Home > Sequence: KAG6580104.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID KAG6580104.1
CAZy Family AA2|AA2
CAZyme Description pectate lyase/amb allergen
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
813 83784.48 4.9623
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiGKB4 19981 N/A 0 19981
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:1 4.2.2.10:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 601 791 1.1e-79 0.983957219251337
PL1 125 316 9.8e-79 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.09e-40 125 319 1 190
Amb_all domain.
214765 Amb_all 4.60e-34 600 794 1 190
Amb_all domain.
226384 PelB 3.60e-16 509 791 40 274
Pectate lyase [Carbohydrate transport and metabolism].
226384 PelB 6.97e-16 130 401 91 345
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 9.13e-15 118 315 12 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.41e-188 29 438 190 589
4.49e-175 4 543 2 534
2.07e-169 504 813 30 339
3.74e-117 29 400 21 398
8.33e-117 508 772 23 296

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.64e-84 31 361 3 325
Pectin Lyase B [Aspergillus niger]
2.12e-81 31 362 3 325
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
2.19e-80 31 362 3 325
Pectin Lyase A [Aspergillus niger]
4.85e-11 94 365 31 315
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]
1.34e-06 148 359 95 312
Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.74e-95 14 364 7 346
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1
3.08e-89 505 806 22 314
Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1
3.08e-89 505 806 22 314
Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2
2.52e-87 14 355 7 335
Probable pectin lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelF PE=3 SV=1
2.94e-87 17 365 10 347
Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000573 0.999394 CS pos: 27-28. Pr: 0.9733

TMHMM  Annotations      download full data without filtering help

Start End
9 31