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CAZyme Information: KAG6579977.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6579977.1 | |||||||||||
| CAZy Family | AA17|AA17 | |||||||||||
| CAZyme Description | polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 132 | 392 | 1.2e-51 | 0.7538461538461538 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 9.19e-54 | 115 | 386 | 1 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.71e-21 | 142 | 401 | 141 | 389 | polygalacturonase |
| 215426 | PLN02793 | 1.59e-18 | 142 | 363 | 145 | 368 | Probable polygalacturonase |
| 227721 | Pgu1 | 2.20e-17 | 146 | 324 | 210 | 398 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 4.15e-16 | 138 | 369 | 111 | 337 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.43e-294 | 1 | 403 | 1 | 403 | |
| 9.72e-213 | 50 | 403 | 9 | 388 | |
| 7.10e-193 | 1 | 403 | 1 | 413 | |
| 7.10e-193 | 1 | 403 | 1 | 413 | |
| 9.48e-189 | 1 | 403 | 1 | 434 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.73e-49 | 97 | 403 | 8 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.05e-49 | 100 | 362 | 3 | 304 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 1.47e-48 | 97 | 403 | 8 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.69e-48 | 99 | 403 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.69e-47 | 113 | 403 | 20 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.22e-52 | 88 | 403 | 16 | 360 | Probable endopolygalacturonase B OS=Aspergillus kawachii OX=1069201 GN=pgaB PE=3 SV=1 |
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| 4.73e-52 | 94 | 403 | 22 | 360 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
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| 4.73e-52 | 94 | 403 | 22 | 360 | Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaB PE=3 SV=1 |
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| 7.32e-50 | 92 | 398 | 19 | 354 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
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| 1.22e-49 | 99 | 403 | 34 | 368 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000290 | 0.999660 | CS pos: 22-23. Pr: 0.9191 |