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CAZyme Information: KAG6579758.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6579758.1 | |||||||||||
| CAZy Family | AA17 | |||||||||||
| CAZyme Description | Endopolygalacturonase 4 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.70e-25 | 3 | 157 | 167 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 7.58e-15 | 3 | 118 | 257 | 370 | Probable polygalacturonase |
| 177865 | PLN02218 | 1.06e-14 | 1 | 126 | 269 | 391 | polygalacturonase ADPG |
| 215540 | PLN03010 | 2.20e-12 | 14 | 126 | 248 | 357 | polygalacturonase |
| 215120 | PLN02188 | 2.12e-08 | 2 | 120 | 234 | 351 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.63e-104 | 1 | 157 | 1 | 157 | |
| 1.66e-101 | 1 | 157 | 207 | 363 | |
| 4.00e-101 | 1 | 157 | 235 | 391 | |
| 3.24e-86 | 1 | 157 | 206 | 362 | |
| 2.12e-84 | 1 | 157 | 206 | 362 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.46e-25 | 1 | 157 | 188 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.46e-25 | 1 | 157 | 188 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.29e-24 | 1 | 153 | 181 | 333 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 8.55e-24 | 1 | 157 | 180 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.20e-23 | 1 | 157 | 180 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.73e-25 | 1 | 157 | 213 | 369 | Probable endopolygalacturonase II OS=Aspergillus aculeatus OX=5053 GN=pgaII PE=2 SV=1 |
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| 3.27e-25 | 1 | 157 | 211 | 367 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 3.27e-25 | 1 | 157 | 211 | 367 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 3.27e-25 | 1 | 157 | 211 | 367 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 4.39e-25 | 1 | 157 | 208 | 364 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000046 | 0.000007 |