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CAZyme Information: KAG6576416.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | KAG6576416.1 | |||||||||||
| CAZy Family | AA17 | |||||||||||
| CAZyme Description | putative polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 2 | 157 | 4.2e-21 | 0.5076923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.96e-22 | 2 | 151 | 98 | 268 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 1.65e-09 | 2 | 127 | 251 | 404 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 177865 | PLN02218 | 2.09e-04 | 34 | 130 | 234 | 354 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.50e-127 | 1 | 182 | 1 | 182 | |
| 5.71e-72 | 2 | 154 | 157 | 334 | |
| 1.05e-71 | 2 | 154 | 179 | 356 | |
| 1.44e-71 | 2 | 154 | 191 | 368 | |
| 1.44e-71 | 2 | 154 | 191 | 368 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.26e-18 | 1 | 158 | 116 | 288 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 8.82e-17 | 2 | 151 | 117 | 296 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 3.97e-16 | 2 | 154 | 113 | 286 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.19e-16 | 2 | 154 | 121 | 294 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.19e-16 | 2 | 154 | 121 | 294 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.00e-19 | 11 | 155 | 169 | 334 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
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| 2.16e-18 | 2 | 155 | 137 | 307 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
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| 2.19e-18 | 2 | 155 | 141 | 314 | Probable endopolygalacturonase A OS=Aspergillus parasiticus OX=5067 GN=pgaA PE=2 SV=1 |
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| 7.83e-18 | 2 | 155 | 138 | 311 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
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| 7.83e-18 | 2 | 155 | 138 | 311 | Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000047 | 0.000005 |