logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KAG4304114.1

You are here: Home > Sequence: KAG4304114.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pneumocystis oryctolagi
Lineage Ascomycota; Pneumocystidomycetes; ; Pneumocystidaceae; Pneumocystis; Pneumocystis oryctolagi
CAZyme ID KAG4304114.1
CAZy Family GH16
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1096 JABTEG010000011|CGC1 127123.74 8.5611
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PoryctolagiCS1 2856 N/A 0 2856
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT50 153 389 2.1e-69 0.9198473282442748

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215278 PLN02502 0.0 644 1093 34 552
lysyl-tRNA synthetase
224111 LysU 5.20e-148 671 1092 12 500
Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis].
273107 lysS_bact 1.55e-138 672 1094 5 493
lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial. This model represents the lysyl-tRNA synthetases that are class II amino-acyl tRNA synthetases. It includes all eukaryotic and most bacterial examples of the enzyme, but not archaeal or spirochete forms. [Protein synthesis, tRNA aminoacylation]
234778 lysS 5.08e-138 671 1092 5 489
lysyl-tRNA synthetase; Reviewed
173607 PTZ00417 5.94e-127 606 1092 18 583
lysine-tRNA ligase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.00e-148 63 412 23 361
3.86e-90 22 388 6 392
3.86e-90 22 388 6 392
4.33e-90 27 388 4 385
1.60e-89 27 388 4 385

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.04e-169 671 1094 8 516
Chain A, Lysine--tRNA ligase [Saccharomyces cerevisiae]
5.96e-153 671 1093 9 511
Loa loa Lysyl-tRNA synthetase in complex with Cladosporin. [Loa loa],5HGQ_B Loa loa Lysyl-tRNA synthetase in complex with Cladosporin. [Loa loa],5HGQ_C Loa loa Lysyl-tRNA synthetase in complex with Cladosporin. [Loa loa],5HGQ_D Loa loa Lysyl-tRNA synthetase in complex with Cladosporin. [Loa loa]
8.17e-153 665 1093 2 508
Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant [Homo sapiens],4YCW_B Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant [Homo sapiens],4YCW_E Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant [Homo sapiens],4YCW_F Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant [Homo sapiens]
8.17e-153 665 1093 2 508
Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_B Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_C Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_D Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_E Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_F Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_G Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4DPG_H Crystal Structure of Human LysRS: P38/AIMP2 Complex I [Homo sapiens],4YCU_A Crystal structure of cladosporin in complex with human lysyl-tRNA synthetase [Homo sapiens],4YCU_B Crystal structure of cladosporin in complex with human lysyl-tRNA synthetase [Homo sapiens],6ILD_A Crystal Structure of Human LysRS: P38/AIMP2 Complex II [Homo sapiens],6ILD_B Crystal Structure of Human LysRS: P38/AIMP2 Complex II [Homo sapiens]
1.07e-152 665 1093 2 508
Crystal Structure of human lysyl-tRNA synthetase L350H mutant [Homo sapiens],6ILH_B Crystal Structure of human lysyl-tRNA synthetase L350H mutant [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.14e-192 622 1094 10 581
Lysine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=krs1 PE=3 SV=1
4.83e-172 621 1094 10 580
Lysine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRS1 PE=1 SV=2
2.19e-163 628 1093 12 571
Lysine--tRNA ligase cla4 OS=Cladosporium cladosporioides OX=29917 GN=cla4 PE=2 SV=1
3.95e-153 664 1093 69 576
Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1
1.19e-151 664 1093 69 576
Lysine--tRNA ligase OS=Homo sapiens OX=9606 GN=KARS1 PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000008 0.000006

TMHMM  Annotations      download full data without filtering help

Start End
30 52
101 123
144 175
185 207
228 247
289 311
338 360
370 389
401 423