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CAZyme Information: KAG2006962.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Coprinopsis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea | |||||||||||
| CAZyme ID | KAG2006962.1 | |||||||||||
| CAZy Family | AA9 | |||||||||||
| CAZyme Description | cellobiose dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 | 1.-.-.-:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA12 | 248 | 634 | 6.9e-124 | 0.9576059850374065 |
| AA8 | 31 | 210 | 2e-39 | 0.9835164835164835 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 406418 | CDH-cyt | 1.43e-54 | 31 | 208 | 1 | 177 | Cytochrome domain of cellobiose dehydrogenase. CDH-cyt is the cytochrome domain, at the N-terminus, of cellobiose dehydrogenase. CDH-cyt folds as a beta sandwich with the topology of the antibody Fab V(H) domain and binds iron. The haem iron is ligated by Met83 and His181 in UniProtKB:Q01738. |
| 187688 | CDH_like_cytochrome | 2.53e-45 | 31 | 201 | 2 | 168 | Heme-binding cytochrome domain of fungal cellobiose dehydrogenases. Cellobiose dehydrogenase (CellobioseDH or CDH) is an extracellular fungal oxidoreductase that degrades both lignin and cellulose. Specifically, CDHs oxidize cellobiose, cellodextrins, and lactose to corresponding lactones, utilizing a variety of electron acceptors. Class-II CDHs are monomeric hemoflavoenzymes that are comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The cytochrome domain of CDH and related enzymes, which this model describes, folds as a beta sandwich and complexes a heme molecule. It is found at the N-terminus of this family of enzymes, and belongs to the DOMON domain superfamily, a ligand-interacting motif found in all three kingdoms of life. |
| 225044 | YliI | 5.03e-14 | 211 | 591 | 22 | 365 | Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism]. |
| 226417 | NosR | 0.002 | 17 | 96 | 193 | 276 | Regulator of nitric oxide reductase transcription [Transcription]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.62e-246 | 8 | 637 | 5 | 634 | |
| 1.62e-246 | 8 | 637 | 5 | 634 | |
| 1.01e-121 | 17 | 634 | 12 | 634 | |
| 1.15e-111 | 16 | 634 | 11 | 631 | |
| 3.19e-111 | 12 | 634 | 11 | 631 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.40e-181 | 248 | 637 | 5 | 395 | Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_A Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_B Chain B, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea] |
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| 8.32e-62 | 29 | 222 | 5 | 195 | Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea] |
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| 3.29e-61 | 263 | 634 | 16 | 385 | Iodide structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30] |
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| 3.38e-61 | 263 | 634 | 17 | 386 | Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30] |
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| 3.47e-61 | 263 | 634 | 18 | 387 | Calcium structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.20e-18 | 29 | 300 | 22 | 273 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 7.34e-13 | 302 | 642 | 145 | 434 | L-sorbosone dehydrogenase OS=Gluconacetobacter liquefaciens OX=89584 PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000474 | 0.999519 | CS pos: 22-23. Pr: 0.9717 |