You are browsing environment: FUNGIDB
CAZyme Information: KAG2006043.1
You are here: Home > Sequence: KAG2006043.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Coprinopsis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea | |||||||||||
| CAZyme ID | KAG2006043.1 | |||||||||||
| CAZy Family | AA9 | |||||||||||
| CAZyme Description | exo-rhamnogalacturonase B, variant 2 | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 106 | 430 | 8.7e-48 | 0.8707692307692307 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.69e-32 | 101 | 380 | 18 | 294 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.20e-24 | 94 | 369 | 106 | 347 | polygalacturonase |
| 215426 | PLN02793 | 3.33e-21 | 110 | 392 | 109 | 393 | Probable polygalacturonase |
| 178580 | PLN03003 | 2.84e-20 | 225 | 384 | 187 | 347 | Probable polygalacturonase At3g15720 |
| 177865 | PLN02218 | 4.50e-19 | 130 | 373 | 149 | 385 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.88e-193 | 43 | 455 | 26 | 437 | |
| 1.88e-193 | 43 | 455 | 26 | 437 | |
| 6.21e-192 | 43 | 455 | 26 | 437 | |
| 1.35e-190 | 35 | 455 | 16 | 435 | |
| 2.04e-185 | 43 | 455 | 42 | 453 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.16e-18 | 131 | 379 | 64 | 321 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
|
| 5.15e-13 | 129 | 374 | 59 | 307 | Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.31e-79 | 38 | 454 | 20 | 427 | Probable exopolygalacturonase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxC PE=3 SV=1 |
|
| 3.90e-77 | 40 | 452 | 29 | 437 | Probable exopolygalacturonase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxC PE=3 SV=1 |
|
| 5.06e-77 | 43 | 452 | 34 | 434 | Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxC PE=3 SV=1 |
|
| 5.06e-77 | 43 | 452 | 34 | 434 | Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxC PE=3 SV=1 |
|
| 6.56e-75 | 40 | 452 | 29 | 437 | Probable exopolygalacturonase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000200 | 0.999797 | CS pos: 27-28. Pr: 0.9764 |