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CAZyme Information: KAG1713497.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1713497.1 | |||||||||||
| CAZy Family | PL3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 124 | 313 | 5.9e-79 | 0.983957219251337 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 5.49e-29 | 122 | 315 | 2 | 189 | Amb_all domain. |
| 366158 | Pec_lyase_C | 1.75e-11 | 132 | 312 | 27 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 226384 | PelB | 6.53e-11 | 97 | 313 | 51 | 274 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.12e-293 | 1 | 400 | 1 | 400 | |
| 1.18e-291 | 1 | 400 | 1 | 400 | |
| 1.68e-291 | 1 | 400 | 1 | 400 | |
| 9.44e-244 | 1 | 398 | 1 | 432 | |
| 7.43e-234 | 1 | 398 | 1 | 432 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.40e-76 | 24 | 360 | 4 | 322 | Pectin Lyase A [Aspergillus niger] |
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| 3.11e-75 | 25 | 365 | 5 | 328 | Pectin Lyase B [Aspergillus niger] |
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| 1.52e-72 | 24 | 360 | 4 | 322 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.39e-93 | 24 | 400 | 25 | 385 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 8.39e-93 | 24 | 400 | 25 | 385 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 3.28e-90 | 1 | 357 | 1 | 339 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 8.24e-90 | 25 | 365 | 25 | 349 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 8.24e-90 | 25 | 365 | 25 | 349 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000183 | 0.999769 | CS pos: 21-22. Pr: 0.9812 |