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CAZyme Information: KAG1713495.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1713495.1 | |||||||||||
| CAZy Family | PL3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 601 | 790 | 2.7e-81 | 0.983957219251337 |
| PL1 | 130 | 320 | 6.2e-80 | 0.983957219251337 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 2.43e-40 | 601 | 793 | 2 | 190 | Amb_all domain. |
| 214765 | Amb_all | 5.96e-38 | 129 | 319 | 1 | 186 | Amb_all domain. |
| 226384 | PelB | 3.09e-19 | 594 | 789 | 82 | 273 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.46e-14 | 604 | 789 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 226384 | PelB | 1.73e-14 | 135 | 384 | 92 | 338 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 534 | 1 | 534 | |
| 1.81e-175 | 21 | 425 | 187 | 588 | |
| 6.97e-166 | 9 | 349 | 15 | 346 | |
| 5.02e-140 | 22 | 301 | 12 | 296 | |
| 1.88e-128 | 500 | 874 | 26 | 399 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.88e-83 | 26 | 404 | 3 | 359 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 1.85e-81 | 26 | 404 | 3 | 359 | Pectin Lyase A [Aspergillus niger] |
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| 3.58e-81 | 26 | 364 | 3 | 324 | Pectin Lyase B [Aspergillus niger] |
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| 4.18e-08 | 123 | 328 | 59 | 285 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.42e-92 | 17 | 423 | 5 | 405 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 4.77e-92 | 17 | 424 | 5 | 402 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 8.38e-91 | 32 | 405 | 29 | 381 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 2.86e-89 | 22 | 413 | 20 | 392 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 2.86e-89 | 22 | 413 | 20 | 392 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000276 | 0.999699 | CS pos: 22-23. Pr: 0.9761 |