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CAZyme Information: KAG1713491.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1713491.1 | |||||||||||
| CAZy Family | PL3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 126 | 317 | 2.1e-79 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.97e-42 | 126 | 320 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 1.85e-16 | 131 | 401 | 91 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.78e-13 | 130 | 316 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 139494 | PRK13335 | 1.46e-05 | 369 | 523 | 18 | 162 | superantigen-like protein SSL3; Reviewed. |
| 411418 | ser_rich_anae_1 | 5.89e-05 | 377 | 517 | 398 | 539 | serine-rich protein. This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.63e-186 | 30 | 402 | 190 | 562 | |
| 6.26e-168 | 11 | 402 | 5 | 405 | |
| 2.04e-161 | 18 | 346 | 18 | 346 | |
| 5.74e-115 | 28 | 298 | 12 | 296 | |
| 2.52e-111 | 29 | 401 | 20 | 398 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.18e-89 | 32 | 362 | 3 | 324 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 1.82e-88 | 32 | 362 | 3 | 325 | Pectin Lyase B [Aspergillus niger] |
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| 1.43e-87 | 32 | 362 | 3 | 324 | Pectin Lyase A [Aspergillus niger] |
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| 3.32e-08 | 130 | 316 | 69 | 276 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.00e-95 | 32 | 361 | 23 | 343 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 8.44e-95 | 18 | 359 | 8 | 341 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 9.10e-94 | 32 | 360 | 21 | 341 | Probable pectin lyase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=pelA PE=3 SV=1 |
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| 1.17e-92 | 26 | 422 | 18 | 403 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 3.29e-92 | 26 | 418 | 18 | 393 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000573 | 0.999384 | CS pos: 28-29. Pr: 0.9634 |