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CAZyme Information: KAG1713490.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1713490.1 | |||||||||||
| CAZy Family | PL3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 657 | 847 | 2.2e-79 | 0.983957219251337 |
| PL1 | 126 | 317 | 1.3e-78 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.56e-40 | 126 | 320 | 1 | 190 | Amb_all domain. |
| 214765 | Amb_all | 6.36e-35 | 656 | 850 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 5.81e-16 | 559 | 903 | 27 | 313 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 226384 | PelB | 1.15e-15 | 131 | 322 | 91 | 279 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 5.74e-13 | 130 | 316 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 371 | 1004 | 1 | 629 | |
| 8.77e-176 | 557 | 933 | 21 | 406 | |
| 2.44e-167 | 562 | 876 | 32 | 346 | |
| 1.57e-114 | 563 | 931 | 24 | 398 | |
| 2.20e-114 | 563 | 931 | 24 | 398 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.04e-84 | 32 | 362 | 3 | 324 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 2.01e-84 | 32 | 362 | 3 | 325 | Pectin Lyase B [Aspergillus niger] |
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| 1.44e-83 | 32 | 362 | 3 | 324 | Pectin Lyase A [Aspergillus niger] |
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| 4.48e-08 | 130 | 316 | 69 | 276 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.10e-94 | 561 | 942 | 22 | 393 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 1.10e-94 | 561 | 942 | 22 | 393 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 7.47e-91 | 32 | 361 | 23 | 343 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 2.61e-90 | 18 | 359 | 8 | 341 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 2.56e-89 | 32 | 360 | 21 | 341 | Probable pectin lyase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=pelA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000450 | 0.999521 | CS pos: 28-29. Pr: 0.9684 |