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CAZyme Information: KAG1708886.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1708886.1 | |||||||||||
| CAZy Family | GT48 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA17 | 7 | 261 | 2.9e-72 | 0.9551020408163265 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 236766 | rne | 9.38e-06 | 194 | 307 | 879 | 1000 | ribonuclease E; Reviewed |
| 183756 | motB | 1.57e-05 | 187 | 311 | 290 | 409 | flagellar motor protein MotB; Reviewed |
| 273167 | rad23 | 7.98e-05 | 202 | 286 | 71 | 147 | UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] |
| 411474 | fibronec_FbpA | 2.04e-04 | 191 | 309 | 154 | 277 | LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity. |
| 237284 | PRK13108 | 8.23e-04 | 193 | 310 | 326 | 445 | prolipoprotein diacylglyceryl transferase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.45e-131 | 1 | 207 | 1 | 217 | |
| 2.91e-131 | 1 | 207 | 1 | 217 | |
| 2.91e-131 | 1 | 207 | 1 | 217 | |
| 7.58e-131 | 1 | 200 | 1 | 200 | |
| 2.95e-129 | 1 | 203 | 1 | 203 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000278 | 0.999708 | CS pos: 19-20. Pr: 0.9792 |