logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KAG1707458.1

You are here: Home > Sequence: KAG1707458.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora capsici
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici
CAZyme ID KAG1707458.1
CAZy Family GT31
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
645 JADEVP010000008|CGC2 68927.85 8.5362
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcapsiciLT1534 28579 763924 5206 23373
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 20 550 1.2e-108 0.9744525547445255

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.37e-34 23 556 2 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.33e-21 25 328 2 298
choline dehydrogenase; Validated
366272 GMC_oxred_N 1.88e-17 117 328 24 215
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
238533 APPLE_Factor_XI_like 2.86e-14 575 642 4 70
Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
405052 PAN_4 1.68e-10 583 627 1 51
PAN domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 644 1 637
8.34e-169 28 644 23 632
1.44e-159 28 642 23 630
1.56e-153 6 534 5 526
1.82e-129 8 547 4 544

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.78e-48 29 549 3 531
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.94e-48 29 549 8 536
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
3.26e-38 28 548 7 538
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.38e-37 28 548 229 760
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4.52e-36 28 549 229 760
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.54e-46 29 549 235 763
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
2.44e-19 28 536 6 519
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
4.17e-17 29 337 2 305
Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1
7.19e-17 29 368 2 337
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
1.65e-15 29 328 6 299
Oxygen-dependent choline dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000379 0.999595 CS pos: 25-26. Pr: 0.9652

TMHMM  Annotations      help

There is no transmembrane helices in KAG1707458.1.