CAZyme Information: KAG1700820.1

Basic Information

• Species: Phytophthora capsici
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici
• CAZyme ID: KAG1700820.1
• CAZy Family: GH53
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
770		87683.78	6.0876

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcapsiciLT1534	28579	763924	5206	23373

• Gene Location: location=JADEVP010000025:542285-544597(-)

Full Sequence      

MMDTHALGSFSVRRWLAVLLVLGLLSVVLLSYRMSSLSVLSVRPFRASRRTAPPTFMLVR
AIGNALPPRHDPARALQNLRFTLEHEQLEDEELATHWVLNRLADEQVARQFRELLTEFGA
EFTELPLALGTYAQAPFHVVVEDRGKDQVHVEATGEDQWTKNQNINAVYGSKNRYALGIN
VARNFMLDIAQKSGAKWLLPWDQTCFLTREAWQQIKNDLSHAPPDRKYFISFMDRLKEEN
DVIFSPDFTVNPWEEPQLIFRNDSIERFDEQLRYGQRDKAALLIRLQVSGVWDRWGWSSW
ERRRTYANLSSDVAGSEEVSSTGYVVRLYSGLEPEVETNTASAGFWREMRRAKGVIKLLD
QLEERVMRELYKYDPTNLLVYNHTLLQIYKEKVGTDGGKQEVASIIADADRALLVATPWT
ITSNEALDPERDSQVFSNFFDRKEEELDDGDLIREMAYNTTALALAWQLTGNTEYAAQAI
AFLDAWCADTTTAMLTTLEYADMSFQKLSTSKDNSTRGSLMGIRHTAVIPMLLDAIRLLN
TTNNSSSEGFPHKIRLWVRDLYNSLQSAYARDTFRWSPGLFALLYDVQVASLAAFLDEPV
TLRFTLGTMQGRLMTMMSSEEKLLIPTGVATKPYTLLMLATWGYAVDLAQQFGLEVHLFH
FDLSPTHREERLNEEGGLLCRFVGHTVPCCQPKGTNGAEHQCVTALQHASEVQLFVYSRI
VRQAVRHCSILQKRQSCVSFAKVQIDSKALSAEEMSRYLLPPYAFLRTAT

Enzyme Prediction     

No EC number prediction in KAG1700820.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL38	447	654	1.3e-21	0.7168458781362007

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398861	Alginate_lyase	3.32e-08	444	606	45	194	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAG9288887.1|PL38	1.49e-55	53	655	205	850
QBY01811.1|GT0|PL38	6.34e-55	53	688	249	881
ACF45869.1|PL38	1.03e-51	53	650	555	1164
AHM03579.1|GT2|PL38	2.21e-51	55	719	242	900
QSB05068.1|PL38	1.18e-49	53	598	397	949

PDB Hits     

KAG1700820.1 has no PDB hit.

Swiss-Prot Hits     

KAG1700820.1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000036	0.000001

TMHMM  Annotations     

Start	End
12	34