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CAZyme Information: KAG1698047.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1698047.1 | |||||||||||
| CAZy Family | GH30 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 127 | 318 | 8.5e-81 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 2.84e-36 | 126 | 318 | 2 | 187 | Amb_all domain. |
| 226384 | PelB | 1.76e-13 | 104 | 323 | 78 | 279 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.01e-11 | 131 | 317 | 23 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.50e-209 | 1 | 299 | 1 | 296 | |
| 5.82e-192 | 17 | 406 | 19 | 408 | |
| 8.00e-165 | 26 | 410 | 194 | 569 | |
| 2.42e-151 | 5 | 400 | 4 | 397 | |
| 3.32e-151 | 19 | 347 | 27 | 346 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.44e-89 | 25 | 388 | 4 | 341 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 3.44e-89 | 26 | 362 | 5 | 324 | Pectin Lyase B [Aspergillus niger] |
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| 6.84e-89 | 25 | 388 | 4 | 341 | Pectin Lyase A [Aspergillus niger] |
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| 3.82e-08 | 116 | 360 | 53 | 308 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.38e-94 | 25 | 388 | 23 | 369 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 1.68e-93 | 26 | 368 | 24 | 348 | Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2 |
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| 3.78e-93 | 20 | 374 | 19 | 361 | Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2 |
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| 1.06e-92 | 12 | 361 | 10 | 342 | Probable pectin lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelA PE=3 SV=1 |
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| 1.19e-92 | 30 | 368 | 29 | 350 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000219 | 0.999759 | CS pos: 20-21. Pr: 0.9804 |