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CAZyme Information: KAG1697269.1

You are here: Home > Sequence: KAG1697269.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora capsici
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici
CAZyme ID KAG1697269.1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
596 64207.36 6.0396
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcapsiciLT1534 28579 763924 5206 23373
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2:4 4.2.2.2:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL3 370 566 5.9e-77 0.9948453608247423
PL3 32 228 1.1e-76 0.9948453608247423

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397360 Pectate_lyase 9.91e-82 27 232 2 199
Pectate lyase.
397360 Pectate_lyase 1.18e-81 365 570 2 199
Pectate lyase.
236797 PRK10927 0.003 265 422 131 309
cell division protein FtsN.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.20e-144 1 269 1 270
2.66e-111 8 253 12 258
1.08e-104 21 253 28 258
4.28e-93 17 269 16 290
4.28e-93 17 269 16 290

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-24 44 196 11 158
Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15]
1.03e-20 34 172 6 138
The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725]
1.05e-20 34 172 7 139
The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii],3T9G_B The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii]
8.03e-20 34 172 15 147
C. bescii Family 3 pectate lyase double mutant K108A in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725],4Z03_B C. bescii Family 3 pectate lyase double mutant K108A in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725]
8.03e-20 34 172 15 147
C. bescii Family 3 pectate lyase mutant E84A [Caldicellulosiruptor bescii DSM 6725],4Z05_B C. bescii Family 3 pectate lyase mutant E84A [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.17e-58 14 249 7 236
Probable pectate lyase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyD PE=3 SV=1
8.17e-58 14 249 7 236
Probable pectate lyase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyD PE=3 SV=1
3.15e-56 16 249 11 235
Probable pectate lyase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyD PE=3 SV=1
8.14e-53 368 587 28 240
Probable pectate lyase G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyG PE=3 SV=1
1.88e-52 30 249 43 258
Probable pectate lyase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000221 0.999792 CS pos: 21-22. Pr: 0.9798

TMHMM  Annotations      help

There is no transmembrane helices in KAG1697269.1.