logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: KAG1696878.1

You are here: Home > Sequence: KAG1696878.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora capsici
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici
CAZyme ID KAG1696878.1
CAZy Family GH28
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
146 15525.85 7.1887
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcapsiciLT1534 28579 763924 5206 23373
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAG1696878.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 10 135 3.9e-35 0.5265306122448979

CDD Domains      help

KAG1696878.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.22e-67 1 133 2 135
4.22e-67 1 133 2 135
5.03e-67 1 133 8 141
1.20e-66 1 133 2 135
1.43e-66 1 133 8 141

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.09e-14 22 133 1 116
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

KAG1696878.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000226 0.999750 CS pos: 21-22. Pr: 0.9773

TMHMM  Annotations      help

There is no transmembrane helices in KAG1696878.1.