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CAZyme Information: KAG1696758.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora capsici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora capsici | |||||||||||
| CAZyme ID | KAG1696758.1 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 45 | 200 | 1.5e-31 | 0.49538461538461537 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 7.66e-35 | 48 | 200 | 1 | 160 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 1.72e-12 | 45 | 200 | 106 | 309 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 2.28e-06 | 48 | 213 | 51 | 223 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 3.72e-06 | 47 | 191 | 79 | 240 | Probable polygalacturonase |
| 215540 | PLN03010 | 3.77e-04 | 53 | 200 | 80 | 229 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.63e-131 | 1 | 212 | 1 | 212 | |
| 6.12e-122 | 1 | 212 | 1 | 212 | |
| 8.68e-122 | 1 | 212 | 1 | 212 | |
| 1.43e-120 | 1 | 212 | 1 | 212 | |
| 1.09e-117 | 1 | 212 | 1 | 212 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.23e-36 | 30 | 200 | 1 | 180 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 1.21e-31 | 28 | 212 | 6 | 195 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.21e-31 | 28 | 212 | 6 | 195 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.01e-31 | 33 | 212 | 3 | 187 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.14e-30 | 31 | 200 | 1 | 175 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.07e-38 | 31 | 212 | 37 | 230 | Polygalacturonase OS=Penicillium expansum OX=27334 GN=PEPG1 PE=3 SV=1 |
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| 8.58e-37 | 1 | 200 | 1 | 219 | Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1 |
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| 2.56e-35 | 47 | 209 | 63 | 231 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
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| 5.29e-35 | 3 | 200 | 7 | 221 | Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1 |
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| 1.05e-34 | 3 | 200 | 7 | 222 | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000203 | 0.999776 | CS pos: 25-26. Pr: 0.8553 |