CAZyme Information: KAF7622500.1

Basic Information

• Species: Aspergillus flavus
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus flavus
• CAZyme ID: KAF7622500.1
• CAZy Family: GH2
• CAZyme Description: Probable rhamnogalacturonase A [Source:UniProtKB/Swiss-Prot;Acc:B8NK45]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
467	AAIH03000170|CGC5	49394.51	4.4093

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AflavusNRRL3357	14313	332952	0	14313

• Gene Location: location=AAIH03000170:1848985-1850669(-)

Full Sequence      

MHSLSLISLALLSPLLVNAQLSGHVGPLTSSSSKASTKTCNVQDYGAKADKETDIGSAIE
KAWDDCAEGGVVYIPSGDYAMSSRLKLSGGKASAIQLDGIIYRTGSDGGNLFMIEHSSDF
EFFSSTSQGAIQGLGYEFHKDGSLNGPRLLRFYDVTDFSVHDVALVDSPAFHLSLDTCKN
AEIYNMAIRGGDSGGLDGVDIWSENVWVHDVEVTNKDECVTVKSPAKNILVENIYCNWSG
GCAMGSLGADTNISDVVYRNVYTWKSNQMYMIKSNGGSGSVSNLVLENFIGHGNAYSLDI
DGEWSSMSTVSGDGVQLNNITVRNWKGTEEDGAARGPIKVVCAEKAPCTDITIDDFALWT
ESGDEQTYSCENGFGSGFCLQDGDGTSSYSTVITETAAPTGYEASSMSNDLSTAFGTDAS
IPIPTIPTSFFPGATPYSALAGAASGNAAKATSSATASRFRHRRGSH

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	67	372	7e-56	0.9476923076923077

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215540	PLN03010	5.12e-25	41	372	48	388	polygalacturonase
395231	Glyco_hydro_28	2.86e-23	147	372	85	314	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865	PLN02218	1.48e-22	41	354	69	404	polygalacturonase ADPG
215120	PLN02188	2.07e-20	41	372	38	389	polygalacturonase/glycoside hydrolase family protein
165802	PLN02155	4.20e-19	41	375	29	380	polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW46234.1|GH28	0.0	1	467	1	467
QMW34178.1|GH28	0.0	1	467	1	467
QRD94066.1|GH28	0.0	1	467	1	467
UDD63080.1|GH28	0.0	1	467	1	467
BAE64322.1|GH28	0.0	1	467	1	467

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	7.59e-224	20	442	1	422	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q2U293|RHGA_ASPOR	0.0	1	467	1	467	Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1
sp|B8NK45|RHGA_ASPFN	0.0	1	467	1	467	Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1
sp|Q5ARE6|RHGA_EMENI	2.86e-260	9	460	7	459	Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
sp|A2QYE5|RHGA_ASPNC	1.23e-239	1	444	1	443	Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
sp|P87160|RHGA_ASPNG	1.35e-236	1	444	1	443	Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000227	0.999730	CS pos: 19-20. Pr: 0.9807

TMHMM  Annotations     

There is no transmembrane helices in KAF7622500.1.