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CAZyme Information: KAF6527643.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium oxysporum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum | |||||||||||
| CAZyme ID | KAF6527643.1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:25 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 113 | 296 | 3.1e-87 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 3.89e-56 | 110 | 298 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 8.01e-27 | 15 | 301 | 34 | 280 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.15e-15 | 107 | 294 | 15 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.49e-192 | 1 | 377 | 1 | 376 | |
| 2.71e-189 | 1 | 377 | 1 | 376 | |
| 2.71e-189 | 1 | 377 | 1 | 376 | |
| 2.71e-189 | 1 | 377 | 1 | 376 | |
| 2.71e-189 | 1 | 377 | 1 | 376 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.61e-123 | 25 | 360 | 7 | 341 | Pectin Lyase B [Aspergillus niger] |
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| 7.35e-118 | 25 | 376 | 7 | 357 | Pectin Lyase A [Aspergillus niger] |
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| 5.50e-115 | 25 | 376 | 7 | 357 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 4.89e-10 | 26 | 297 | 5 | 249 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 2.89e-09 | 125 | 269 | 130 | 299 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.78e-127 | 25 | 376 | 27 | 378 | Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1 |
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| 2.06e-124 | 11 | 376 | 12 | 378 | Pectin lyase OS=Colletotrichum gloeosporioides OX=474922 GN=PNLA PE=3 SV=1 |
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| 3.71e-122 | 25 | 362 | 26 | 362 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 5.09e-122 | 25 | 362 | 26 | 361 | Probable pectin lyase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelA PE=3 SV=1 |
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| 7.45e-122 | 25 | 360 | 27 | 361 | Probable pectin lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000207 | 0.999751 | CS pos: 19-20. Pr: 0.9749 |