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CAZyme Information: KAF6523482.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium oxysporum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum | |||||||||||
| CAZyme ID | KAF6523482.1 | |||||||||||
| CAZy Family | GH43 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT109 | 1467 | 1702 | 5.3e-90 | 0.5790754257907542 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 409190 | PGAP4-like_fungal | 6.03e-103 | 1467 | 1740 | 21 | 375 | uncharacterized fungal proteins similar to Post-GPI attachment to proteins factor 4. This subfamily contains uncharacterized fungal proteins with similarity to animal post-GPI attachment to proteins factor 4 (PGAP4), also known as post-GPI attachment to proteins GalNAc transferase 4 or transmembrane protein 246 (TMEM246). PGAP4 has been shown to be a Golgi-resident GPI-GalNAc transferase. Many eukaryotic proteins are anchored to the cell surface through glycolipid glycosylphosphatidylinositol (GPI). GPIs have a conserved core but exhibit diverse N-acetylgalactosamine (GalNAc) modifications. PGAP4 knockout cells lose GPI-GalNAc structures. PGAP4 is most likely involved in the initial steps of GPI-GalNAc biosynthesis. In contrast to other Golgi glycotransferases, it contains three transmembrane domains. Proteins from this subfamily contain the putative catalytic site of PGAP4 and may have similar activities. |
| 404983 | Helitron_like_N | 1.64e-64 | 334 | 529 | 1 | 197 | Helitron helicase-like domain at N-terminus. This family is found in Helitrons, recently recognized eukaryotic transposons that are predicted to amplify by a rolling-circle mechanism. In many instances a protein-coding gene is disrupted by their insertion. |
| 350795 | DEXSc_Pif1_like | 8.59e-36 | 1018 | 1185 | 17 | 183 | DEAD-box helicase domain of Pif1. Pif1 and other members of this family are RecD-like helicases involved in maintaining genome stability through unwinding double-stranded DNAs (dsDNAs), DNA/RNA hybrids, and G quadruplex (G4) structures. The members of Pif1 helicase subfamily studied so far all appear to contribute to telomere maintenance. Pif1 is a member of the DEAD-like helicases superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| 350691 | DEXSc_RecD-like | 7.56e-19 | 1020 | 1183 | 19 | 154 | DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| 404490 | AAA_30 | 1.48e-18 | 990 | 1202 | 1 | 169 | AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. There is a Walker A and Walker B. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.79e-206 | 1467 | 1793 | 24 | 424 | |
| 2.62e-183 | 1467 | 1793 | 24 | 424 | |
| 2.62e-183 | 1467 | 1793 | 24 | 424 | |
| 1.94e-182 | 1467 | 1793 | 24 | 424 | |
| 1.44e-181 | 1467 | 1793 | 24 | 424 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.34e-23 | 1018 | 1412 | 26 | 401 | Crystal structure of Pif1 helicase from Bacteroides in complex with AMPPNP [Bacteroides sp. 3_1_23],5FTC_A Crystal structure of Pif1 helicase from Bacteroides in complex with ADP [Bacteroides sp. 3_1_23],5FTD_A Crystal structure of Pif1 helicase from Bacteroides apo form [Bacteroides sp. 3_1_23],5FTE_A Crystal structure of Pif1 helicase from Bacteroides in complex with ADP-AlF3 and ssDNA [Bacteroides sp. 3_1_23] |
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| 3.13e-23 | 1018 | 1412 | 26 | 401 | Structure of Bacteroides sp Pif1 complexed with tailed dsDNA resulting in ssDNA bound complex [Bacteroides fragilis],5FHD_B Structure of Bacteroides sp Pif1 complexed with tailed dsDNA resulting in ssDNA bound complex [Bacteroides fragilis],5FHE_A Crystal structure of Bacteroides Pif1 bound to ssDNA [Bacteroides fragilis],5FHF_A Crystal structure of Bacteroides sp Pif1 in complex with ADP-AlF4 [Bacteroides fragilis],5FHG_A Structure of unliganded Pif1 from Bacteroides sp [Bacteroides fragilis],5FHG_B Structure of unliganded Pif1 from Bacteroides sp [Bacteroides fragilis],6L3G_A Chain A, ATP-dependent DNA helicase [Bacteroides sp. AF32-8BH],6L3G_B Chain B, ATP-dependent DNA helicase [Bacteroides sp. AF32-8BH] |
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| 5.61e-23 | 1018 | 1412 | 26 | 401 | Crystal structure of Pif1 helicase from Bacteroides double mutant L95C-I339C [Bacteroides sp. 3_1_23] |
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| 2.06e-17 | 1018 | 1445 | 25 | 440 | Chain A, PIF1 helicase [Thermus oshimai] |
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| 2.07e-17 | 1018 | 1445 | 26 | 441 | Chain A, PIF1 helicase [Thermus oshimai JL-2],6S3E_B Chain B, PIF1 helicase [Thermus oshimai JL-2],6S3H_A Chain A, PIF1 helicase [Thermus oshimai JL-2],6S3H_B Chain B, PIF1 helicase [Thermus oshimai JL-2],6S3I_A Chain A, PIF1 helicase [Thermus oshimai],6S3M_A Chain A, PIF1 helicase [Thermus oshimai],6S3M_B Chain B, PIF1 helicase [Thermus oshimai],6S3N_A Chain A, PIF1 helicase [Thermus oshimai],6S3N_B Chain B, PIF1 helicase [Thermus oshimai],6S3O_A Chain A, PIF1 helicase [Thermus oshimai] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.24e-21 | 991 | 1408 | 33 | 413 | ATP-dependent DNA helicase pif1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pif1 PE=3 SV=1 |
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| 2.02e-19 | 1020 | 1499 | 20 | 522 | ATP-dependent DNA helicase pif1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=pif1 PE=3 SV=1 |
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| 5.71e-19 | 909 | 1410 | 109 | 594 | ATP-dependent DNA helicase PIF1 OS=Xenopus laevis OX=8355 GN=pif1 PE=2 SV=1 |
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| 2.41e-18 | 991 | 1410 | 310 | 760 | ATP-dependent DNA helicase pfh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pfh1 PE=1 SV=1 |
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| 9.18e-18 | 1020 | 1410 | 228 | 593 | ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000053 | 0.000000 |