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CAZyme Information: KAF5686368.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium circinatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium circinatum | |||||||||||
| CAZyme ID | KAF5686368.1 | |||||||||||
| CAZy Family | GH88 | |||||||||||
| CAZyme Description | endo-polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:14 | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 39 | 365 | 3.5e-70 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 9.02e-132 | 43 | 372 | 1 | 319 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 2.86e-25 | 82 | 370 | 185 | 467 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215426 | PLN02793 | 2.19e-23 | 96 | 348 | 145 | 386 | Probable polygalacturonase |
| 177865 | PLN02218 | 4.49e-22 | 96 | 365 | 158 | 415 | polygalacturonase ADPG |
| 178580 | PLN03003 | 9.59e-15 | 85 | 332 | 111 | 333 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.11e-272 | 1 | 374 | 1 | 374 | |
| 1.13e-269 | 1 | 374 | 1 | 374 | |
| 4.60e-269 | 1 | 374 | 1 | 374 | |
| 4.60e-269 | 1 | 374 | 1 | 374 | |
| 3.78e-268 | 1 | 374 | 1 | 374 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.47e-231 | 26 | 374 | 1 | 349 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 9.51e-97 | 28 | 365 | 3 | 328 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 8.17e-94 | 20 | 365 | 3 | 335 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.17e-94 | 20 | 365 | 3 | 335 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.31e-90 | 28 | 365 | 3 | 327 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.37e-238 | 1 | 374 | 1 | 373 | Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1 |
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| 2.08e-155 | 28 | 372 | 129 | 469 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
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| 2.95e-155 | 28 | 373 | 173 | 514 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
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| 1.03e-148 | 28 | 373 | 154 | 495 | Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1 |
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| 1.03e-148 | 28 | 373 | 154 | 495 | Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000240 | 0.999742 | CS pos: 25-26. Pr: 0.9444 |