CAZyme Information: KAF5686027.1

Basic Information

• Species: Fusarium circinatum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium circinatum
• CAZyme ID: KAF5686027.1
• CAZy Family: GH78
• CAZyme Description: pectate lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
367	JAAQPE010000098|CGC2	37503.65	3.6940

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FcircinatumNRRL25331	13905	N/A	0	13905

• Gene Location: location=JAAQPE010000098:250815-251967(-)

Full Sequence      

MQYRVIMAATLAIGAYAAPAPLITGAPSLSRRQDSEGGSGGSSVLDAPMTIAAGESFDGG
NAIFDRGVSCTGQVEGGDSDAVFILEKGATLSNVRIGPNQIEGVHCNGGCTLNNVVWDAV
CEDAFSIKKQEDGETTTINGGGATGAEDKVIQHNGGGTVIIKDFEVSDFGKLYRSCGNCK
EMPARHVEISGGSASDGKILVGINPNMGDTAKISGIQLTNVPKECITFEGVTDGSEPKEV
GTCDGSGSDSGSDSGSGSGDSTETPATPTTPADGSETPAASEVADPVETSTDGSQGDDQS
GDDQSGDNDDSSNDDSDDDNKDDNSDDENKDEESDNENQDQESESDNQQAQPSQPNFNFG
SGSFGGF

Enzyme Prediction     

No EC number prediction in KAF5686027.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL3	41	230	6.4e-72	0.9845360824742269

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397360	Pectate_lyase	1.28e-101	44	235	12	200	Pectate lyase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGJ00946.1|PL3_2	6.74e-201	1	367	1	367
QGI70056.1|PL3_2	6.74e-201	1	367	1	367
CCT74639.1|PL3_2	1.99e-196	7	367	1	361
QKD60682.1|PL3_2	5.92e-194	1	367	1	373
QGI87418.1|PL3_2	1.78e-191	1	358	1	363

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1EE6_A	4.13e-24	44	235	4	188	Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15]
3B90_A	8.07e-24	65	239	11	205	Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B90_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
3B4N_A	3.50e-23	48	239	111	323	Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B4N_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_A Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
4EW9_A	9.10e-20	40	178	5	139	The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725]
3T9G_A	9.30e-20	40	178	6	140	The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii],3T9G_B The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5ATC7|PLYH_EMENI	2.26e-69	41	240	45	243	Pectate lyase H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyH PE=1 SV=1
sp|Q0CJ49|PLYD_ASPTN	1.02e-68	41	242	39	238	Probable pectate lyase D OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyD PE=3 SV=1
sp|Q5B7Z3|PLYE_EMENI	2.10e-68	41	239	41	236	Pectate lyase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyE PE=1 SV=1
sp|A1DCY5|PLYD_NEOFI	5.57e-68	41	240	26	224	Probable pectate lyase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyD PE=3 SV=1
sp|B0YB89|PLYD_ASPFC	5.74e-68	41	240	27	225	Probable pectate lyase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyD PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000540	0.999428	CS pos: 32-33. Pr: 0.5954

TMHMM  Annotations     

There is no transmembrane helices in KAF5686027.1.