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CAZyme Information: KAF5669342.1

You are here: Home > Sequence: KAF5669342.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium circinatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium circinatum
CAZyme ID KAF5669342.1
CAZy Family CE8|CE8|CE8|CE8|CE8
CAZyme Description choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 67796.68 4.9178
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FcircinatumNRRL25331 13905 N/A 0 13905
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAF5669342.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 23 604 1e-84 0.9911971830985915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 4.19e-52 97 607 83 534
choline dehydrogenase; Validated
225186 BetA 5.70e-47 96 609 81 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 3.74e-32 469 600 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.14e-19 259 603 235 574
Protein HOTHEAD
366272 GMC_oxred_N 3.86e-16 94 364 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 610 1 640
0.0 1 610 1 640
0.0 1 610 1 640
0.0 1 610 1 640
0.0 1 610 1 640

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.27e-32 21 607 5 563
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
1.04e-31 23 607 7 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.25e-31 23 607 83 639
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
1.40e-31 23 607 7 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.40e-31 23 607 7 563
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.47e-42 21 610 2 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
6.13e-41 21 610 2 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1
8.14e-41 21 610 2 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=betA PE=3 SV=1
2.15e-40 23 610 6 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
2.15e-40 23 610 6 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000390 0.999588 CS pos: 15-16. Pr: 0.9811

TMHMM  Annotations      help

There is no transmembrane helices in KAF5669342.1.