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CAZyme Information: KAF5665594.1

You are here: Home > Sequence: KAF5665594.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium circinatum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium circinatum
CAZyme ID KAF5665594.1
CAZy Family CE12
CAZyme Description murein transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
484 52549.98 6.7161
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FcircinatumNRRL25331 13905 N/A 0 13905
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in KAF5665594.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 63 346 2e-46 0.8430769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215426 PLN02793 1.57e-18 40 394 57 414
Probable polygalacturonase
177865 PLN02218 4.53e-18 37 347 69 389
polygalacturonase ADPG
178580 PLN03003 1.38e-17 37 341 25 332
Probable polygalacturonase At3g15720
395231 Glyco_hydro_28 2.63e-17 138 348 61 285
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 4.93e-16 37 338 48 346
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 484 1 488
0.0 1 484 1 488
0.0 1 484 1 488
0.0 1 484 1 488
0.0 1 484 1 488

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.24e-96 18 462 1 404
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
2.36e-09 47 341 21 338
Chain A, POLYGALACTURONASE [Pectobacterium carotovorum]
3.70e-08 35 331 27 381
The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2.06e-06 196 348 173 324
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.10e-97 14 472 15 431
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
5.90e-97 14 472 15 431
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1
3.89e-96 14 462 15 422
Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1
1.01e-95 18 472 22 437
Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2
1.52e-94 14 472 14 430
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000327 0.999654 CS pos: 17-18. Pr: 0.9781

TMHMM  Annotations      help

There is no transmembrane helices in KAF5665594.1.