dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: KAB8204217.1

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Basic Information help

Species

Aspergillus parasiticus

Lineage

Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus parasiticus

CAZyme ID

KAB8204217.1

CAZy Family

PL3

CAZyme Description

LysM domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5N6DGV1]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
176	ML734982\|CGC1	19199.75	4.7881

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AparasiticusCBS117618	14005	N/A	253	13752

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	-	-

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
212030	LysM	3.09e-09	47	91	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	2.00e-08	128	172	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
180536	PRK06347	2.07e-08	47	158	406	510	1,4-beta-N-acetylmuramoylhydrolase.
180536	PRK06347	3.49e-08	47	158	331	436	1,4-beta-N-acetylmuramoylhydrolase.
197609	LysM	1.59e-06	129	174	1	44	Lysin motif.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
5.95e-123	1	176	1	176
1.99e-121	1	176	1	176
1.99e-121	1	176	1	176
1.62e-116	1	176	1	178
3.82e-57	34	176	117	258

PDB Hits help

KAB8204217.1 has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
1.56e-39	36	176	146	293	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
1.60e-14	42	176	26	181	LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03438 PE=3 SV=1
5.05e-13	37	95	379	437	Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03699 PE=1 SV=2
4.67e-12	36	95	476	536	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
1.16e-09	36	125	362	459	LysM domain-containing protein ARB_01155/01156 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01155/01156 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000253	0.999720	CS pos: 20-21. Pr: 0.9829

TMHMM Annotations download full data without filtering help

Start	End
7	29