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CAZyme Information: K441DRAFT_704879-t45_1-p1

You are here: Home > Sequence: K441DRAFT_704879-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cenococcum geophilum
Lineage Ascomycota; Dothideomycetes; ; Gloniaceae; Cenococcum; Cenococcum geophilum
CAZyme ID K441DRAFT_704879-t45_1-p1
CAZy Family GT39
CAZyme Description glycoside hydrolase family 13 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1182 131908.80 5.7527
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Cgeophilum1.58 14745 794803 38 14707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.18:166 2.4.1.18:50

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH13 246 539 2e-148 0.9965870307167235

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
410877 F1-ATPase_beta_CD 0.0 786 1062 1 277
F1 ATP synthase beta subunit, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The mitochondrial extrinsic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic. Alpha and beta subunits form the globular catalytic moiety, a hexameric ring of alternating alpha and beta subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton-translocating domain.
223133 AtpD 0.0 731 1178 23 468
FoF1-type ATP synthase, beta subunit [Energy production and conversion].
211621 atpD 0.0 731 1175 21 461
ATP synthase, F1 beta subunit. The sequences of ATP synthase F1 alpha and beta subunits are related and both contain a nucleotide-binding site for ATP and ADP. They have a common amino terminal domain but vary at the C-terminus. The beta chain has catalytic activity, while the alpha chain is a regulatory subunit. Proton translocating ATP synthase, F1 beta subunit is homologous to proton translocating ATP synthase archaeal/vacuolar(V1), A subunit. [Energy metabolism, ATP-proton motive force interconversion]
236447 PRK09280 0.0 731 1175 22 462
F0F1 ATP synthase subunit beta; Validated
183615 PRK12597 0.0 732 1174 23 460
F0F1 ATP synthase subunit beta; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 698 1 696
0.0 1 698 1 696
0.0 1 698 1 715
0.0 3 692 4 694
0.0 13 698 9 698

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.53e-304 2 693 8 695
Crystal structure of human glycogen branching enzyme (GBE1) [Homo sapiens],4BZY_B Crystal structure of human glycogen branching enzyme (GBE1) [Homo sapiens],4BZY_C Crystal structure of human glycogen branching enzyme (GBE1) [Homo sapiens]
1.36e-300 33 693 6 663
Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose [Homo sapiens],5CLT_B Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose [Homo sapiens],5CLT_C Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose [Homo sapiens],5CLW_A Crystal structure of human glycogen branching enzyme (GBE1) in complex with maltoheptaose [Homo sapiens],5CLW_B Crystal structure of human glycogen branching enzyme (GBE1) in complex with maltoheptaose [Homo sapiens],5CLW_C Crystal structure of human glycogen branching enzyme (GBE1) in complex with maltoheptaose [Homo sapiens]
5.84e-258 731 1178 26 474
Chain D, ATP synthase beta subunit [Ogataea angusta],5LQX_E Chain E, ATP synthase beta subunit [Ogataea angusta],5LQX_F Chain F, ATP synthase beta subunit [Ogataea angusta],5LQY_D Chain D, ATP synthase beta subunit [Ogataea angusta],5LQY_E Chain E, ATP synthase beta subunit [Ogataea angusta],5LQY_F Chain F, ATP synthase beta subunit [Ogataea angusta],5LQZ_D Chain D, ATP synthase beta subunit [Ogataea angusta],5LQZ_E Chain E, ATP synthase beta subunit [Ogataea angusta],5LQZ_F Chain F, ATP synthase beta subunit [Ogataea angusta]
3.95e-257 732 1178 60 507
Structure of the F1c10 complex from Yarrowia lipolytica ATP synthase [Yarrowia lipolytica],5FL7_E Structure of the F1c10 complex from Yarrowia lipolytica ATP synthase [Yarrowia lipolytica],5FL7_F Structure of the F1c10 complex from Yarrowia lipolytica ATP synthase [Yarrowia lipolytica]
3.17e-256 22 691 9 688
Structure of the Starch Branching Enzyme I (BEI) from Oryza sativa L [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 20 698 6 683
1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=be1 PE=2 SV=3
0.0 25 694 15 681
1,4-alpha-glucan-branching enzyme OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) OX=747089 GN=GLC3 PE=2 SV=2
0.0 20 698 11 688
1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=gbeA PE=2 SV=1
0.0 26 696 5 685
1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=GLC3 PE=3 SV=1
0.0 22 695 8 682
1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=GLC3 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000036 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in K441DRAFT_704879-t45_1-p1.