CAZyme Information: I314_04744-t35_1-p1

Basic Information

• Species: Cryptococcus gattii VGIII
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGIII
• CAZyme ID: I314_04744-t35_1-p1
• CAZy Family: GH79
• CAZyme Description: alginate lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
504		52393.61	5.9446

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CgattiiCA1873	6782	1296111	148	6634

• Gene Location: location=KN848901:113057-114727(-)

Full Sequence      

MLRSIIAILPLLASFPLSSAYAVSDDVALESRSWYERAADALSSRADTAQGHSGLRSRAH
TSGLRRRAPRHYSEAGQKLVRRKKETTQRRDGEKKKKKRSCKAKTTGLGAAATAASSSVS
EEAASSTAILSGSLGAVANAATAGANSQAESSAVSSSSSDAAHVTNYAPTTTSSAESSTI
TDSASAVADALSPGISVSLSVSAAISINTSIDILTTYTAPDSATTAPTSVVSASASAATS
SAANSSTSELSSDLLPWGHGISSWTTSDGLLSYDAALKPLTAGKLPTIGNAPDGTSALQA
TYPAGSYGLTNSGFSFYTAGDHSRVEVDNASEVSLSYSVFFEEGFGFNKGGKMPGLYGGT
SLSEAKSCSGGRQTDRESCFSARLMWRTEGAGEIYDYLPVSYTSTDDGYGESIDREAFTW
ATGRWQTVAIRVKLNDVGQANGEQELIVDGESKINITGVTFATVAGTKIYGIMAQTFFGG
HTSDWASPKDQSLYFKDWTLTVLA

Enzyme Prediction     

No EC number prediction in I314_04744-t35_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL14	294	500	2.8e-112	0.9953917050691244

CDD Domains     

I314_04744-t35_1-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADV23900.1|PL14_4	1.07e-235	1	504	1	503
KGB76842.1|PL14_4	1.74e-220	1	504	1	504
UOH83410.1|PL14_4	6.53e-195	1	504	1	499
AUB27086.1|PL14_4	5.31e-194	1	504	1	499
AFR97104.1|PL14_4	5.31e-194	1	504	1	499

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GMT_A	1.91e-29	297	500	58	270	Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3A0N_A	2.57e-09	293	500	35	240	Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]

Swiss-Prot Hits     

I314_04744-t35_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000847	0.999115	CS pos: 22-23. Pr: 0.9692

TMHMM  Annotations     

There is no transmembrane helices in I314_04744-t35_1-p1.