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CAZyme Information: I308_01788-t35_1-p1

You are here: Home > Sequence: I308_01788-t35_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus gattii VGIV
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGIV
CAZyme ID I308_01788-t35_1-p1
CAZy Family GH13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 KN848858|CGC4 45830.54 5.0440
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgattiiIND107 6843 1296105 147 6696
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in I308_01788-t35_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 210 429 1.4e-52 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 8.70e-50 200 429 3 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.14e-80 180 437 11 270
1.69e-79 191 437 6 254
9.53e-79 191 437 6 254
1.60e-78 180 437 11 270
6.02e-77 191 437 6 254

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.44e-98 192 437 198 444
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
1.27e-80 191 437 28 276
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.61e-11 199 431 304 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000411 0.999556 CS pos: 19-20. Pr: 0.9758

TMHMM  Annotations      help

There is no transmembrane helices in I308_01788-t35_1-p1.