CAZyme Information: I308_01304-t35_1-p1

Basic Information

• Species: Cryptococcus gattii VGIV
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGIV
• CAZyme ID: I308_01304-t35_1-p1
• CAZy Family: GH128
• CAZyme Description: alginate lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
503		52419.51	5.3085

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CgattiiIND107	6843	1296105	147	6696

• Gene Location: location=KN848857:546547-548215(+)

Full Sequence      

MLRFIIAILPLLASFPLSSAYAVSDDVALESRSWYERAADALSSRADTAQGHSGLRSRAH
TSGLRRRAPRHYSEAGQKLVRRKKETTQRRDGEKKKKKRSCKAKTTGLGAAATAASSSVS
EEAASSTTILSGSLGAVANAATAGTNSQVESSAVSSSSSDAAHVTNYAPTTTSSAESSTI
TDSDSAVADALSPEISVSLSVSAAISINTSIDILTTYTVPDSATTAPTSAASASASTTSS
ATNSSTSELSSDLLPWGHGISSWTTSDGLLSYDAALKPLTAGKLPSVANAPDGTSALQAT
YPAGSYGLTNSGFSFYTAGDHSGVEVDNASEVSLSYSVFFEEGFGFNKGGKMPGLYGGTS
LSEAKSCSGGRQTDRESCFSARLMWRTEGAGEIYDYLPVSYTGTDDGYGESIDRGAFTWA
TGRWQTVAIRVKLNDVGQANGEQELIVDGESKINISGVTFATEAGTKIYGIMAQTFFGGH
TSDWASPKDQSLYFKDWTLTVLA

Enzyme Prediction     

No EC number prediction in I308_01304-t35_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL14	293	499	6.4e-114	0.9953917050691244

CDD Domains     

I308_01304-t35_1-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADV23900.1|PL14_4	2.04e-228	1	503	1	503
KGB76842.1|PL14_4	2.05e-221	1	503	1	504
AUB27086.1|PL14_4	5.89e-193	1	503	1	499
AFR97104.1|PL14_4	5.89e-193	1	503	1	499
UOH83410.1|PL14_4	2.38e-192	1	503	1	499

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GMT_A	1.89e-29	296	499	58	270	Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3A0N_A	8.37e-09	292	499	35	240	Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]

Swiss-Prot Hits     

I308_01304-t35_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000879	0.999119	CS pos: 22-23. Pr: 0.9660

TMHMM  Annotations     

There is no transmembrane helices in I308_01304-t35_1-p1.