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CAZyme Information: I306_03828-t38_1-p1

You are here: Home > Sequence: I306_03828-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus gattii VGI
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGI
CAZyme ID I306_03828-t38_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
254 28216.83 5.2591
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgattiiEJB2 6908 1296103 145 6763
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in I306_03828-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 41 247 7.4e-44 0.9017857142857143

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 3.60e-32 44 247 33 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.25e-183 1 254 1 254
5.58e-153 1 254 147 445
2.18e-133 4 254 154 446
2.18e-133 4 254 154 446
2.46e-131 4 254 149 441

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.10e-33 32 251 31 285
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
3.72e-08 66 252 160 347
Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II) [Sorangium cellulosum So ce56],6UAX_B Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II) [Sorangium cellulosum So ce56]
4.21e-06 76 222 91 242
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) [Amycolatopsis mediterranei],6UAR_A Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose [Amycolatopsis mediterranei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.04e-13 34 249 317 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.995624 0.004366

TMHMM  Annotations      help

There is no transmembrane helices in I306_03828-t38_1-p1.