CAZyme Information: I306_02822-t38_1-p1

Basic Information

• Species: Cryptococcus gattii VGI
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGI
• CAZyme ID: I306_02822-t38_1-p1
• CAZy Family: GH18
• CAZyme Description: alpha-L-rhamnosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
792		89953.07	5.6741

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CgattiiEJB2	6908	1296103	145	6763

• Gene Location: location=KN848659:4188-6726(-)

Full Sequence      

MVTSEEQRTINSLQANWVWVPNWIDSSSDNSAARLVSFTRSFSLSSTPTSAVLYFSADTR
YKLFINGERVAVGPTKGHSSIWYYETLDIAPYLKKGQNDIEFLVIRYFASSRGGMPFERT
TFPGLTVVGEVGDVDLTSKEGWEAVVDQSRVYPTGLVDDVFLHINERVSATSSRAAPLTP
IPYSLKTLNGELPPWRLRPRSIPLPESSPVTVNCIHACQSPIPPSDWFTFFDSSEPLILP
AGTSHSLDIQAEVHSTAFTKWIFFSEKGSEVKFRLTYSEGYELDPRQYPWLRTKGDRLDS
KNGHLLGPYDEVTLQLSPGQTVVYEPFWFRTFRLIRLQIEVGDQPIKLMSFEAVQVNYPL
GVKAGWREPVMKENEKIWEVSIRTLRNCMFDGYSDCPFYEQLQYSGDSRSVGLFHYLLSG
DDRLMRQAITNFAASITPEGLTQSRFPSHVPQIIAAFSLYWILQISDHYLYFGDTSYTKS
FVPKIDGVLAFFDSHIDELGLVSGISEDVWQYCDWVTSWSATEDHPDKGVPTSGRKSNRH
TYLSLLYAYVLKQAALLLRQVGRAGNAMEYEERAEAVIEAIRKHCYDGEFFTDSTADIAD
DLAYSQHCQVFATLAGVITPSQASRLLTKAFSNPKFSKCSYVMIFYALRAFAIAGDETYQ
HFYKTIWNPWRKMLKNNLTTWEEDDVRQRSDCHAWGSVPVYEFCTEVAGIQPLEPGCRKI
LFKPRLSLSDELEAKIALGKDNLAVVKWWEEGGKKIVTLELEKPVMVVVKKPGEKQEEND
EPMSSLRLICKI

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	264	765	5.8e-93	0.9384920634920635
CBM67	15	150	7.5e-21	0.75

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
407469	Bac_rhamnosid6H	1.21e-17	375	698	14	332	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
400715	Bac_rhamnosid_N	1.29e-08	48	124	3	83	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADV19373.1|GH78	0.0	1	792	1	792
KGB79550.2|CBM67|GH78	0.0	1	792	1	792
UOH81172.1|GH78	0.0	1	792	1	792
AUB23154.1|GH78	0.0	1	792	1	792
AFR93595.1|GH78	0.0	1	792	1	792

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OKX_A	9.35e-30	330	772	503	942	Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits     

I306_02822-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000009	0.000012

TMHMM  Annotations     

There is no transmembrane helices in I306_02822-t38_1-p1.