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CAZyme Information: I306_01787-t38_1-p1

You are here: Home > Sequence: I306_01787-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus gattii VGI
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGI
CAZyme ID I306_01787-t38_1-p1
CAZy Family GH128
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
433 45073.28 4.7208
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgattiiEJB2 6908 1296103 145 6763
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in I306_01787-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 205 425 3.2e-56 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 8.62e-62 194 425 4 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.34e-81 187 433 7 254
1.06e-79 187 433 7 254
1.26e-79 187 433 23 270
1.01e-78 187 433 23 270
1.90e-77 185 433 5 254

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.67e-204 21 433 22 444
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
2.52e-82 187 433 29 276
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]
1.70e-09 190 428 23 262
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) [Amycolatopsis mediterranei],6UAR_A Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose [Amycolatopsis mediterranei]
4.12e-09 190 428 23 262
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199Q mutant) from Amycolatopsis mediterranei (AmGH128_I) in the complex with laminarihexaose [Amycolatopsis mediterranei],6UFZ_A Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199Q mutant) from Amycolatopsis mediterranei (AmGH128_I) [Amycolatopsis mediterranei]
9.98e-09 190 428 23 262
Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose [Amycolatopsis mediterranei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.71e-12 202 427 312 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000651 0.999336 CS pos: 19-20. Pr: 0.9763

TMHMM  Annotations      help

There is no transmembrane helices in I306_01787-t38_1-p1.