logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: I303_06082-t42_1-p1

You are here: Home > Sequence: I303_06082-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kwoniella dejecticola
Lineage Basidiomycota; Tremellomycetes; ; Cryptococcaceae; Kwoniella; Kwoniella dejecticola
CAZyme ID I303_06082-t42_1-p1
CAZy Family GT1
CAZyme Description alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
405 43080.90 5.0796
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_KdejecticolaCBS10117 8724 1296121 122 8602
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in I303_06082-t42_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 137 360 3.1e-72 0.9857142857142858

CDD Domains      help

I303_06082-t42_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.36e-161 3 401 3 389
4.34e-158 3 401 3 394
4.21e-157 13 401 9 389
1.20e-156 13 401 9 389
1.20e-156 13 401 9 389

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.65e-41 139 360 59 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

I303_06082-t42_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000260 0.999722 CS pos: 23-24. Pr: 0.9757

TMHMM  Annotations      download full data without filtering help

Start End
382 404