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CAZyme Information: I303_05565-t42_1-p1

You are here: Home > Sequence: I303_05565-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kwoniella dejecticola
Lineage Basidiomycota; Tremellomycetes; ; Cryptococcaceae; Kwoniella; Kwoniella dejecticola
CAZyme ID I303_05565-t42_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
455 KI894032|CGC9 48560.58 4.8630
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_KdejecticolaCBS10117 8724 1296121 122 8602
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 59 436 7.3e-50 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.52e-26 119 438 46 318
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 1.79e-26 43 341 77 367
polygalacturonase ADPG
215540 PLN03010 3.69e-26 33 440 43 394
polygalacturonase
178580 PLN03003 4.88e-21 43 335 33 306
Probable polygalacturonase At3g15720
215426 PLN02793 7.06e-19 43 432 62 406
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.80e-120 9 451 2 447
5.45e-119 35 451 33 452
3.35e-113 56 451 29 424
2.74e-109 35 451 30 434
2.74e-109 35 451 30 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.91e-21 37 329 19 304
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
7.64e-13 121 333 66 282
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
1.32e-08 36 329 2 262
Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum]
4.71e-07 213 329 200 314
Chain A, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.93e-112 37 450 27 423
Probable exopolygalacturonase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxC PE=3 SV=1
3.44e-110 5 453 7 438
Probable exopolygalacturonase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxC PE=3 SV=1
9.73e-110 5 453 7 438
Probable exopolygalacturonase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxC PE=3 SV=1
1.77e-109 34 451 33 433
Probable exopolygalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxC PE=3 SV=1
1.77e-109 34 451 33 433
Probable exopolygalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000341 0.999638 CS pos: 17-18. Pr: 0.9720

TMHMM  Annotations      help

There is no transmembrane helices in I303_05565-t42_1-p1.