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CAZyme Information: HpaG814377:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hyaloperonospora arabidopsidis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis | |||||||||||
| CAZyme ID | HpaG814377:RNA-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.151:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH12 | 92 | 241 | 8.8e-30 | 0.9807692307692307 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396303 | Glyco_hydro_12 | 5.63e-33 | 34 | 231 | 1 | 194 | Glycosyl hydrolase family 12. |
| 235746 | PRK06215 | 4.68e-11 | 2 | 193 | 14 | 186 | hypothetical protein; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.32e-65 | 1 | 242 | 1 | 239 | |
| 4.11e-63 | 1 | 239 | 1 | 236 | |
| 4.11e-63 | 1 | 239 | 1 | 236 | |
| 4.11e-63 | 1 | 239 | 1 | 236 | |
| 4.11e-63 | 1 | 239 | 1 | 236 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.03e-51 | 18 | 242 | 21 | 242 | Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus],4NPR_B Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus] |
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| 1.70e-49 | 17 | 242 | 7 | 228 | Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus] |
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| 5.54e-49 | 25 | 242 | 8 | 221 | Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus] |
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| 1.32e-36 | 22 | 242 | 1 | 217 | Chain A, GH12 beta-1, 4-endoglucanase [Aspergillus fischeri] |
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| 2.83e-36 | 21 | 242 | 6 | 225 | Chain A, Glycoside hydrolase [Aspergillus cervinus],7P1Z_B Chain B, Glycoside hydrolase [Aspergillus cervinus],7P1Z_C Chain C, Glycoside hydrolase [Aspergillus cervinus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.45e-51 | 15 | 242 | 13 | 240 | Xyloglucan-specific endo-beta-1,4-glucanase 1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XEG1 PE=1 SV=1 |
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| 1.79e-50 | 20 | 242 | 18 | 237 | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xgeA PE=3 SV=1 |
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| 1.79e-50 | 20 | 242 | 18 | 237 | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=xgeA PE=3 SV=1 |
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| 2.20e-49 | 20 | 240 | 18 | 238 | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=xgeA PE=3 SV=1 |
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| 4.02e-49 | 1 | 242 | 1 | 237 | Inactive glycoside hydrolase XLP1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XLP1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000909 | 0.999081 | CS pos: 21-22. Pr: 0.9087 |