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CAZyme Information: HpaG813940:RNA-p1

You are here: Home > Sequence: HpaG813940:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hyaloperonospora arabidopsidis
Lineage Oomycota; NA; ; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis
CAZyme ID HpaG813940:RNA-p1
CAZy Family PL3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
621 68266.29 6.3765
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_HarabidopsidisEmoy2 14267 559515 285 13982
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.170:2

CDD Domains      help

HpaG813940:RNA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.34e-253 20 621 17 721
3.30e-13 74 324 61 271
5.21e-13 74 328 89 311
1.38e-12 74 328 71 291
1.40e-12 74 328 68 282

PDB Hits      help

HpaG813940:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

HpaG813940:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000273 0.999678 CS pos: 20-21. Pr: 0.9811

TMHMM  Annotations      download full data without filtering help

Start End
489 508